Anne Denton's Publications

2008

Dietmar H. Dorr, Anne M. Denton, "Generalised Sequence Signatures through Symbolic Clustering," International Journal of Data Mining and Bioinformatics, (in press).
Dietmar H. Dorr, Anne M. Denton, "Clustering Sequences by Overlap," International Journal of Data Mining and Bioinformatics, (in press).
Anne M. Denton, Christopher A. Besemann and Dietmar H. Dorr, " Pattern-based Time-series Subsequence Clustering Using Radial Distribution Functions," Knowledge and Information Systems (KAIS) journal, (in press). DOI:10.1007/s10115-008-0125-7
Dietmar Dorr and Anne Denton, "A pattern mining approach toward discovering generalized sequence signatures," SIAM International Conference on Data Mining (SDM08), Atlanta, GA, April 24-26, 2008.
Anne Denton, "Clustering of Time Series Data," in Encyclopedia of Data Warehousing and Mining 2nd Edition, ed. John Wang, Idea Group Publishing, Hershey, PA, 2008.
Anne Denton and Christopher Besemann, "Association Rule Mining of Relational Data, " in Encyclopedia of Data Warehousing and Mining 2nd Edition, ed. John Wang, Idea Group Publishing, Hershey, PA, 2008.

Kenneth Lepper, Steven L. Reneau, Jennifer Thorstad, Anne Denton, "OSL dating of a lacustrine to fluvial transitional sediment sequence in Valle Toledo, Valles caldera, New Mexico," New Mexico Geology, 29(4), 112-116, 2007.
Dietmar Dorr and Anne Denton, "Generalized Sequence Signatures through Symbolic Clustering," Workshop on Machine Learning in Biomedicine and Bioinformatics in conjunction with the Sixth International Conference on Machine Learning and Applications, Cincinnati, OH, Dec. 13-15, 2007.
Jianfei Wu and Anne Denton, " Mining Vector-Item Patterns for Annotating Protein Domains," Mining Multiple Information Sources Workshop in conjunction with the ACM KDD '07 Conference on Knowledge Discovery and Data Mining, San Jose, CA, Aug. 12, 2007, ISBN: 978-1-59593-840-4.
Anne Denton and Angshu Kar, "Finding Differentially Expressed Genes Through Noise Elimination," Workshop on Data Mining for Biomedical Informatics in conjunction with the Sixth SIAM International Conference on Data Mining, Minneapolis, MN, April 28, 2007. (pdf)
Christopher Besemann and Anne Denton, "Mining Edge-disjoint Patterns in Graph-relational Data," Workshop on Data Mining for Biomedical Informatics in conjunction with the Sixth SIAM International Conference on Data Mining, Minneapolis, MN, April 28, 2007. (pdf)

Christopher Besemann, Anne Denton, Nathan J Carr and Birgit M Pruess, "BISON: bio-interface for the semi-global analysis of network patterns," Source Code for Biology and Medicine, 1:8, 2006.
Birgit M. Prüβ, Christopher Besemann, Anne Denton, and Alan J. Wolfe, "A complex transcription network controls the early stages of biofilm formation," J. Bacteriol. 188:3731-3739, 2006.
Imad Rahal, Dongmei Ren, Weihua Wu, Anne Denton, Christopher Besemann, and William Perrizo, “Exploiting edge semantics in citation graphs using efficient, vertical ARM,” Knowledge And Information Systems (KAIS) Journal, Vol.10, No.1, 57-91, Springer-Verlag London, 2006.
William Perrizo, Qin Ding, Maleq Kahn, Qiang Ding, and Anne Denton, “Exploiting edge semantics in citation graphs using efficient, vertical ARM,” International Journal of Business Intelligence and Data Mining 2(1), 2006.
Christopher Besemann, Anne Denton, Ajay Yekkirala, Ron Hutchison, and Marc Anderson, "Understanding Annotations in Protein Interaction Networks", in Advanced Data Mining Technologies in Bioinformatics, ed. Hui-Huang Hsu, Idea Group Publishing, Hershey, PA, 2006.

Anne Denton, "Kernel-density-based clustering of time series subsequences using a continuous random-walk noise model," In Proceedings The Fifth IEEE International Conference on Data Mining (ICDM'05), Houston, Texas, Nov. 27-30, 2005. (pdf)
Christopher Besemann and Anne Denton, "Integration of Profile Hidden Markov Model Output into Association Rule Mining," In Proceedings The 11th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (KDD), Chickago, IL, Aug. 21-24, 2005. (pdf)
Anne Denton, "Clustering of Time Series Data," in Encyclopedia of Data Warehousing and Mining, ed. John Wang, Idea Group Publishing, Hershey, PA, 2005.
Anne Denton and Christopher Besemann, "Association Rule Mining of Relational Data, " in Encyclopedia of Data Warehousing and Mining, ed. John Wang, Idea Group Publishing, Hershey, PA, 2005.

Sisir Ray, Anne Denton, Christopher Besemann, and Kendall E. Nygard, "Learning Theory and Styles in Online Computer Science Courses," 2004 WSEAS Int. Conf. on Engineering Education, EE'04, Venice, Italy, Nov. 2004. Also: Advances in Engineering Education, 2005 .
Anne Denton, "Density-based clustering of time series subsequences," The Third Workshop on Mining Temporal and Sequential Data (TDM 04) in conjunction with The Tenth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Seattle, WA, Aug. 22, 2004. (pdf)
Christopher Besemann, Anne Denton, Ajay Yekkirala, Ron Hutchison, and Marc Anderson, "Differential association rule mining for the study of protein-protein interaction networks," The Fourth Workshop on Data Mining in Bioinformatics (BIOKDD 04) in conjunction with the Tenth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Seattle, WA, Aug. 22, 2004. (pdf)
Anne Denton and William Perrizo, "A kernel-based semi-naive Bayesian classifier using P-trees," In Proceedings 2004 SIAM Int. Conf. on Data Mining (SDM’04), Lake Buena Vista, FL, April 2004. (pdf)
Anne Denton and William Perrizo, "Decision tree induction for dynamic high-dimensional data using P-trees," In Proceedings 19th Int. Conf. on Computers and Their Applications (CATA’04), Seattle, WA, March 2004. (pdf)

Anne Denton and Paul Juell, "Visualization of content information in networks using GlyphNet," In Proceedings Third International Workshop on Visual Data Mining in conjunction with The Third IEEE International Conference on Data Mining (VDM@ICDM2003), Melbourne, FL, November 19, 2003.
Paul Juell, Vijayakumar Shanmugasundaram, and Anne Denton, "Effectiveness of visualization for student use," In Proceedings World Conference on Educational Multimedia, Hypermedia and Telecommunications (ED-MEDIA'03), Honolulu, Hawaii, USA, June 21-26, 2003. (doc)
William Perrizo and Anne Denton, "Framework unifying association rule mining, clustering, and classification," In Proceedings CSITeA conference, Rio de Janeiro, Brazil, June 5-7, 2003. (pdf)
William Perrizo, Qin Ding, Anne Denton, Kirk Scott, Qiang Ding, and Maleq Khan, "PINE - Podium incremental neighbor evaluator for spatial data using P-trees," In Proceedings Symposium on Applied Computing (SAC'03), Melbourne, Florida, USA, 2003. (pdf)
Amal Perera, Anne Denton, Pratap Kotala, William Jockheck, Willy Valdivia Granda, and William Perrizo "P-tree classification of yeast gene deletion data." SIGKDD Explorations, Vol. 4, Issue 2, January 2003. (pdf)

Anne Denton, Qiang Ding, William Perrizo, and Qin Ding, "Efficient hierarchical clustering of large data sets using P-trees," In Proceedings 15th International Conference on Computer Applications in Industry and Engineering (CAINE'02), San Diego, California, USA, 2002. ( pdf )
William Perrizo, Qin Ding, and Anne Denton, "Lazy classifiers using P-trees." In Proceedings 15th International Conference on Computer Applications in Industry and Engineering (CAINE'02), San Diego, California, USA, 2002. (pdf)

Anne Denton and Hartmut Löwen, "Effective interaction and density profiles of confined charged colloids," Thin Solid Films, 330, 7-13, 1998.
Anne Bohle (now Anne Denton), Robert Holyst, and Thomas Vilgis, "Polydispersity and ordered phases in solutions of rod-like macromolecules," Phys. Rev. Lett., 76, 1396, 1996. ( e-print arxive version )